Guides

This section provides step-by-step instructions for common tasks in the CropXR data infrastructure.

Study Workflow

• General Workflow - End-to-end guide for study preparation, data upload, and metadata entry

SEEK Catalogue

• Before You Upload - Prerequisites, permissions, and finding data before uploading a dataset
• Short Guide - Quick reference for SEEK metadata entry
• Full Guide - Detailed step-by-step instructions
• High-Level Example - Example study walkthrough

Command Line Tool

• Install the Data Tool - Install rhub and sign in
• Upload a Dataset - Upload a folder of data to an assay in the catalogue
• Download a Dataset - Download a dataset you found in the catalogue
• Common Errors - What to do when a command gives an error

Research Drive

Research Drive is no longer used for new data; to access existing data, see the Research Drive documentation.